BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015A09LP1|AL426776
(849 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1203 1608 0.0
>3x_Contig1203
Length = 4988
Score = 1608 bits (810), Expect = 0.0
Identities = 830/836 (99%), Gaps = 1/836 (0%)
Strand = Plus / Minus
Query: 1 gtgaaggggtcttgtagtcacgtgactagatcacataacgtcttttaatggagtttctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3529 gtgaaggggtcttgtagtcacgtgactagatcacataacgtcttttaatggagtttctat 3470
Query: 61 ttataccttgtgtaaactttggctcctttgacactcgacgtccctggcatctgtaactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3469 ttataccttgtgtaaactttggctcctttgacactcgacgtccctggcatctgtaactaa 3410
Query: 121 tgtccacgcttttcttccctgtttcatagtgattcttgttccttacgtcatgagtggtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3409 tgtccacgcttttcttccctgtttcatagtgattcttgttccttacgtcatgagtggtta 3350
Query: 181 cacganaaaaaaaaacgaaaagaaaaaaaaaacgacattgcggaaaaagcaaatcatagt 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3349 cacga-aaaaaaaaacgaaaagaaaaaaaaaacgacattgcggaaaaagcaaatcatagt 3291
Query: 241 gtactctcagcttcttctatgttaccactgaaacgattacactgcggaaaagaaatcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3290 gtactctcagcttcttctatgttaccactgaaacgattacactgcggaaaagaaatcaat 3231
Query: 301 tgcaaaacaattaaaaaatctcgactgacagcaacgctcagtgagaataggctggtagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3230 tgcaaaacaattaaaaaatctcgactgacagcaacgctcagtgagaataggctggtagca 3171
Query: 361 accagagacagctacaaaccggaaatacttaaaggagataataattcaaaagtcagtaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3170 accagagacagctacaaaccggaaatacttaaaggagataataattcaaaagtcagtaac 3111
Query: 421 gttaacgtcatttgatcctttcaacgactgcagcctgggtgttagtgtgtgatttcgatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3110 gttaacgtcatttgatcctttcaacgactgcagcctgggtgttagtgtgtgatttcgatt 3051
Query: 481 accgcaagcataagtagaagttagacaatagaatagattaatatatattttttggcgcct 540
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 3050 accgcaagcataagtagaagttagacaatagaatagattaatatatatctcccggcgcct 2991
Query: 541 gtgttgatgcaatttagttgctggatcggttcatggttcatctgccctgatccggctcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2990 gtgttgatgcaatttagttgctggatcggttcatggttcatctgccctgatccggctcct 2931
Query: 601 catctcatcttgatttttttgattgtagtttctttatggttgcacagccaataaagtaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2930 catctcatcttgatttttttgattgtagtttctttatggttgcacagccaataaagtaac 2871
Query: 661 cgtagatggttcgaatagagtatgaatcttcaacgtttttttttttccaattataaattc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2870 cgtagatggttcgaatagagtatgaatcttcaacgtttttttttttccaattataaattc 2811
Query: 721 ataatcttttgaagcaaaagccgtacgtwatctgtacagtcctcacattcttcaatgaca 780
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2810 ataatcttttgaagcaaaagccgtacgtaatctgtacagtcctcacattcttcaatgaca 2751
Query: 781 tagtaataaaaatattgttaaatgtgtggaattatgtatcatatattaatacatat 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2750 tagtaataaaaatattgttaaatgtgtggaattatgtatcatatattaatacatat 2695
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,573
Number of Sequences: 1807
Number of extensions: 14573
Number of successful extensions: 155
Number of sequences better than 1.0e-20: 1
length of query: 849
length of database: 10,358,551
effective HSP length: 16
effective length of query: 833
effective length of database: 10,329,639
effective search space: 8604589287
effective search space used: 8604589287
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)